EnhancerDB
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  3. rs397940306[chr17:860871]
Enhancers that have rs397940306[chr17:860871]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 845785 881195 enh32038
Astrocyte Colon (HCT116) Pancreas Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs397940306[chr17:860871]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 860868 860883 FOXP1 JASPAR yes 52645280
chr17 860869 860884 FOXP1 JASPAR yes 52645281
chr17 860870 860885 FOXP1 JASPAR yes 52645282
chr17 860870 860891 IRF1 JASPAR yes 52645283
chr17 860871 860886 FOXP1 JASPAR yes 52645284
Genes associated with rs397940306[chr17:860871], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More