EnhancerDB
  1. Home
  2. SNP
  3. rs397959970[chr12:122859862]
Enhancers that have rs397959970[chr12:122859862]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 122849366 122861555 enh15067
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Adrenal Uterus Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs397959970[chr12:122859862]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 122859849 122859865 SOX4 JASPAR yes 124272848
chr12 122859856 122859877 IRF1 JASPAR yes 124272849
chr12 122859857 122859878 IRF1 JASPAR yes 124272850
chr12 122859858 122859879 IRF1 JASPAR yes 124272851
chr12 122859859 122859874 FOXP1 JASPAR yes 124272852
chr12 122859859 122859880 IRF1 JASPAR yes 124272853
chr12 122859860 122859881 IRF1 JASPAR yes 124272854
chr12 122859861 122859876 FOXP1 JASPAR yes 124272855
chr12 122859861 122859882 IRF1 JASPAR yes 124272856
chr12 122859862 122859877 FOXP1 JASPAR yes 124272857
chr12 122859862 122859883 IRF1 JASPAR yes 124272858
Genes associated with rs397959970[chr12:122859862], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More