EnhancerDB
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  3. rs397960392[chr11:9697478]
Enhancers that have rs397960392[chr11:9697478]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 9692645 9715679 enh1633
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Uterus Blood (Karpas-422) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Heart
chr11 9697347 9697585 vista9579
VISTA
Transcript factors that have rs397960392[chr11:9697478]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 9696964 9697580 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107956287
chr11 9696987 9697657 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107956288
chr11 9697216 9697592 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107956289
chr11 9697257 9699404 ZNF274 GTRD no Blood (GM12878) 21469033
chr11 9697257 9699404 ZNF274 GTRD no Blood (GM12878) 107956290
chr11 9697263 9697519 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107956291
chr11 9697380 9697596 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107956292
chr11 9697462 9697478 SOX4 JASPAR yes 37262010
chr11 9697462 9697478 SOX4 JASPAR yes 114038490
chr11 9697463 9697478 SOX21 JASPAR yes 37262011
chr11 9697463 9697478 SOX21 JASPAR yes 114038491
chr11 9697472 9697481 SRY JASPAR yes 37262012
chr11 9697472 9697481 SRY JASPAR yes 114038492
Genes associated with rs397960392[chr11:9697478], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More