EnhancerDB
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  3. rs397974246[chr17:57821453]
Enhancers that have rs397974246[chr17:57821453]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 57820705 57849586 enh4505
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs397974246[chr17:57821453]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 57821441 57821461 RREB1 JASPAR yes 55075608
chr17 57821441 57821462 IRF1 JASPAR yes 55075609
chr17 57821442 57821463 IRF1 JASPAR yes 55075610
chr17 57821443 57821458 STAT2 JASPAR yes 55075611
chr17 57821445 57821460 IRF9 JASPAR yes 55075612
chr17 57821446 57821458 IRF1 JASPAR yes 55075613
chr17 57821447 57821468 IRF1 JASPAR yes 55075614
chr17 57821448 57821454 TCF4 TRANSFAC yes 55075615
chr17 57821448 57821463 FOXP1 JASPAR yes 55075616
chr17 57821449 57821460 FOXP2 JASPAR yes 55075617
chr17 57821449 57821461 FOXC2 JASPAR yes 55075618
chr17 57821449 57821464 STAT2 JASPAR yes 55075619
chr17 57821450 57821465 FOXP1 JASPAR yes 55075620
chr17 57821453 57821468 FOXP1 JASPAR yes 55075621
Genes associated with rs397974246[chr17:57821453], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More