EnhancerDB
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  3. rs397978934[chr1:1775830]
Enhancers that have rs397978934[chr1:1775830]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 1770710 1799155 enh6
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs397978934[chr1:1775830]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 1775828 1775843 FOXP1 JASPAR yes 26205871
chr1 1775829 1775844 FOXP1 JASPAR yes 26205872
chr1 1775829 1775850 IRF1 JASPAR yes 26205873
chr1 1775830 1775845 FOXP1 JASPAR yes 26205874
Genes associated with rs397978934[chr1:1775830], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More