EnhancerDB
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  3. rs397979089[chr1:8443072]
Enhancers that have rs397979089[chr1:8443072]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8427225 8493496 enh42
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs397979089[chr1:8443072]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8443061 8443074 DUXA JASPAR yes 26546178
chr1 8443067 8443082 MEF2C JASPAR yes 26546179
chr1 8443067 8443088 IRF1 JASPAR yes 26546180
chr1 8443069 8443084 FOXP1 JASPAR yes 26546181
chr1 8443070 8443085 FOXP1 JASPAR yes 26546182
chr1 8443071 8443077 TBP TRANSFAC yes 26546183
chr1 8443071 8443086 FOXP1 JASPAR yes 26546184
chr1 8443072 8443087 FOXP1 JASPAR yes 26546185
chr1 8443072 8443093 IRF1 JASPAR yes 26546186
Genes associated with rs397979089[chr1:8443072], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More