EnhancerDB
  1. Home
  2. SNP
  3. rs397979449[chr1:19779287]
Enhancers that have rs397979449[chr1:19779287]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19747725 19800935 enh99
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs397979449[chr1:19779287]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19779277 19779298 IRF1 JASPAR yes 27192354
chr1 19779279 19779294 PRDM1 JASPAR yes 27192355
chr1 19779279 19779294 STAT2 JASPAR yes 27192356
chr1 19779280 19779294 SPIC JASPAR yes 27192357
chr1 19779280 19779294 STAT1 JASPAR yes 27192358
chr1 19779281 19779302 IRF1 JASPAR yes 27192359
chr1 19779282 19779297 FOXP1 JASPAR yes 27192360
chr1 19779282 19779303 IRF1 JASPAR yes 27192361
chr1 19779283 19779304 IRF1 JASPAR yes 27192362
chr1 19779284 19779299 FOXP1 JASPAR yes 27192363
chr1 19779284 19779305 IRF1 JASPAR yes 27192364
chr1 19779285 19779306 IRF1 JASPAR yes 27192365
chr1 19779286 19779301 FOXP1 JASPAR yes 27192366
chr1 19779286 19779307 IRF1 JASPAR yes 27192367
chr1 19779287 19779302 FOXP1 JASPAR yes 27192368
Genes associated with rs397979449[chr1:19779287], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More