EnhancerDB
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  3. rs397979593[chr1:23429600]
Enhancers that have rs397979593[chr1:23429600]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 23421969 23432217 enh11605
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs397979593[chr1:23429600]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 23429589 23429610 IRF1 JASPAR yes 27412548
chr1 23429598 23429602 YY1 TRANSFAC yes 27412549
chr1 23429598 23429613 FOXP1 JASPAR yes 27412550
chr1 23429599 23429614 FOXP1 JASPAR yes 27412551
chr1 23429600 23429615 FOXP1 JASPAR yes 27412552
Genes associated with rs397979593[chr1:23429600], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More