EnhancerDB
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  3. rs397979677[chr1:25095394]
Enhancers that have rs397979677[chr1:25095394]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25085286 25108435 enh141
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Blood (Karpas-422) Uterus Stomach Skin (Keratinocyte) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs397979677[chr1:25095394]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25094820 25096310 ZNF274 GTRD no Blood (GM12878) 107802466
chr1 25095390 25095410 RREB1 JASPAR yes 27529323
chr1 25095392 25095407 FOXP1 JASPAR yes 27529324
chr1 25095393 25095408 FOXP1 JASPAR yes 27529325
chr1 25095393 25095414 IRF1 JASPAR yes 27529326
chr1 25095394 25095409 FOXP1 JASPAR yes 27529327
chr1 25095394 25095415 IRF1 JASPAR yes 27529328
Genes associated with rs397979677[chr1:25095394], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More