EnhancerDB
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  3. rs397981940[chr1:171408933]
Enhancers that have rs397981940[chr1:171408933]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 171385965 171412775 enh12367
Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Prostate (RWPE1)
Transcript factors that have rs397981940[chr1:171408933]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 171408927 171408948 IRF1 JASPAR yes 33081281
chr1 171408932 171408947 FOXP1 JASPAR yes 33081282
chr1 171408933 171408948 FOXP1 JASPAR yes 33081283
Genes associated with rs397981940[chr1:171408933], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More