EnhancerDB
  1. Home
  2. SNP
  3. rs397983296[chr1:235152708]
Enhancers that have rs397983296[chr1:235152708]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235130325 235168235 enh997
Bone Marrow (K562) Liver Astrocyte Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs397983296[chr1:235152708]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235152038 235152739 ZNF274 GTRD no Bone Marrow (K562) 21403159
chr1 235152109 235152735 ZNF274 GTRD no Liver (HepG2) 21403161
chr1 235152697 235152718 IRF1 JASPAR yes 36342891
chr1 235152701 235152716 FOXP1 JASPAR yes 36342894
chr1 235152703 235152718 FOXP1 JASPAR yes 36342895
chr1 235152704 235152725 IRF1 JASPAR yes 36342896
chr1 235152705 235152720 FOXP1 JASPAR yes 36342897
chr1 235152707 235152713 TBP TRANSFAC yes 36342898
chr1 235152708 235152723 PRDM1 JASPAR yes 36342899
chr1 235152708 235152723 STAT2 JASPAR yes 36342900
Genes associated with rs397983296[chr1:235152708], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More