EnhancerDB
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  3. rs397988309[chr2:235882297]
Enhancers that have rs397988309[chr2:235882297]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 235861765 235887439 enh19351
Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Uterus Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs397988309[chr2:235882297]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 235882291 235882312 IRF1 JASPAR yes 81924974
chr2 235882296 235882311 FOXP1 JASPAR yes 81924975
chr2 235882297 235882312 FOXP1 JASPAR yes 81924976
Genes associated with rs397988309[chr2:235882297], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More