EnhancerDB
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  3. rs397999575[chr5:150159391]
Enhancers that have rs397999575[chr5:150159391]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 150155345 150173055 enh22722
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs397999575[chr5:150159391]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 150159379 150159391 PKNOX1 JASPAR yes 66899551
chr5 150159379 150159391 TGIF1 JASPAR yes 66899552
chr5 150159379 150159391 TGIF2 JASPAR yes 66899553
chr5 150159381 150159393 HLF JASPAR yes 66899554
chr5 150159383 150159396 NFKB2 JASPAR yes 66899555
chr5 150159388 150159391 MYB TRANSFAC yes 66899556
chr5 150159389 150159399 ZNF740 JASPAR yes 66899557
chr5 150159390 150159400 SP1 JASPAR yes 66899558
chr5 150159390 150159400 ZNF740 JASPAR yes 66899559
chr5 150159390 150159410 RREB1 JASPAR yes 66899560
chr5 150159391 150159401 ZNF740 JASPAR yes 66899561
chr5 150159391 150159405 PLAG1 JASPAR yes 66899562
chr5 150159391 150159411 RREB1 JASPAR yes 66899563
Genes associated with rs397999575[chr5:150159391], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More