EnhancerDB
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  3. rs398000649[chr6:16685083]
Enhancers that have rs398000649[chr6:16685083]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 16667585 16734115 enh23080
Liver Astrocyte Colon (HCT116) Adrenal Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr6 16684658 16685097 vista51164
VISTA
Transcript factors that have rs398000649[chr6:16685083]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 16685079 16685094 STAT2 JASPAR yes 70326567
chr6 16685079 16685094 STAT2 JASPAR yes 100327081
Genes associated with rs398000649[chr6:16685083], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More