EnhancerDB
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  3. rs398030020[chr16:81568248]
Enhancers that have rs398030020[chr16:81568248]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 81542851 81638595 enh16838
Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs398030020[chr16:81568248]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 81568240 81568250 MZF1 JASPAR yes 11840980
chr16 81568243 81568252 CDX1 JASPAR yes 11840982
chr16 81568243 81568253 HOXA13 JASPAR yes 11840983
chr16 81568243 81568253 HOXB13 JASPAR yes 11840984
chr16 81568243 81568253 HOXD13 JASPAR yes 11840985
chr16 81568244 81568265 IRF1 JASPAR yes 11840986
chr16 81568245 81568260 FOXP1 JASPAR yes 11840987
chr16 81568247 81568253 TBP TRANSFAC yes 11840988
chr16 81568247 81568262 FOXP1 JASPAR yes 11840989
chr16 81568248 81568263 STAT2 JASPAR yes 11840990
Genes associated with rs398030020[chr16:81568248], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More