EnhancerDB
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  3. rs398030170[chr17:2792111]
Enhancers that have rs398030170[chr17:2792111]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2744850 2808324 enh4213
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs398030170[chr17:2792111]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2792090 2792111 REST JASPAR yes 52782668
chr17 2792105 2792126 IRF1 JASPAR yes 52782672
chr17 2792106 2792127 IRF1 JASPAR yes 52782673
chr17 2792108 2792129 IRF1 JASPAR yes 52782674
chr17 2792110 2792125 FOXP1 JASPAR yes 52782675
chr17 2792110 2792131 IRF1 JASPAR yes 52782676
chr17 2792111 2792126 FOXP1 JASPAR yes 52782677
Genes associated with rs398030170[chr17:2792111], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More