EnhancerDB
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  3. rs398030608[chr17:28035607]
Enhancers that have rs398030608[chr17:28035607]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 28029886 28064015 enh4330
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs398030608[chr17:28035607]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 28035605 28035620 FOXP1 JASPAR yes 53751526
chr17 28035606 28035621 FOXP1 JASPAR yes 53751527
chr17 28035606 28035627 IRF1 JASPAR yes 53751528
chr17 28035607 28035622 FOXP1 JASPAR yes 53751529
chr17 28035607 28035628 IRF1 JASPAR yes 53751530
Genes associated with rs398030608[chr17:28035607], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More