EnhancerDB
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  3. rs398031175[chr17:55997993]
Enhancers that have rs398031175[chr17:55997993]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55982093 56031480 enh4496
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs398031175[chr17:55997993]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55997972 55997993 IRF1 JASPAR yes 54999476
chr17 55997976 55997997 IRF1 JASPAR yes 54999482
chr17 55997977 55997998 IRF1 JASPAR yes 54999484
chr17 55997978 55997999 IRF1 JASPAR yes 54999485
chr17 55997982 55998003 IRF1 JASPAR yes 54999486
chr17 55997983 55997998 FOXP1 JASPAR yes 54999487
chr17 55997983 55998004 IRF1 JASPAR yes 54999488
chr17 55997987 55998008 IRF1 JASPAR yes 54999489
chr17 55997988 55998003 FOXP1 JASPAR yes 54999490
chr17 55997988 55998009 IRF1 JASPAR yes 54999491
chr17 55997989 55998010 IRF1 JASPAR yes 54999492
chr17 55997990 55998005 FOXP1 JASPAR yes 54999493
chr17 55997990 55998011 IRF1 JASPAR yes 54999494
chr17 55997992 55998007 FOXP1 JASPAR yes 54999495
chr17 55997993 55998008 FOXP1 JASPAR yes 54999496
Genes associated with rs398031175[chr17:55997993], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More