EnhancerDB
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  3. rs398049132[chr1:16131430]
Enhancers that have rs398049132[chr1:16131430]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16111145 16132915 enh11541
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs398049132[chr1:16131430]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16131418 16131439 IRF1 JASPAR yes 27003620
chr1 16131420 16131441 IRF1 JASPAR yes 27003621
chr1 16131424 16131445 IRF1 JASPAR yes 27003622
chr1 16131425 16131440 FOXP1 JASPAR yes 27003623
chr1 16131425 16131446 IRF1 JASPAR yes 27003624
chr1 16131427 16131442 FOXP1 JASPAR yes 27003625
chr1 16131429 16131444 FOXP1 JASPAR yes 27003626
chr1 16131430 16131445 FOXP1 JASPAR yes 27003627
Genes associated with rs398049132[chr1:16131430], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More