EnhancerDB
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  3. rs398050968[chr5:173190077]
Enhancers that have rs398050968[chr5:173190077]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 173178093 173268555 enh8886
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr5 173189921 173190166 vista50229
VISTA
Transcript factors that have rs398050968[chr5:173190077]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 173190072 173190082 NFATC3 JASPAR yes 67901801
chr5 173190072 173190082 NFATC3 JASPAR yes 70766604
chr5 173190074 173190081 NFATC2 JASPAR yes 67901802
chr5 173190074 173190081 NFATC2 JASPAR yes 70766605
Genes associated with rs398050968[chr5:173190077], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More