EnhancerDB
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  3. rs398079067[chr17:55568253]
Enhancers that have rs398079067[chr17:55568253]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55530146 55569915 enh4488
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs398079067[chr17:55568253]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55568248 55568263 FOXP1 JASPAR yes 54960964
chr17 55568249 55568260 FOXP2 JASPAR yes 54960965
chr17 55568250 55568265 FOXP1 JASPAR yes 54960966
Genes associated with rs398079067[chr17:55568253], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More