EnhancerDB
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  3. rs398079119[chr17:64454604]
Enhancers that have rs398079119[chr17:64454604]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 64453792 64473217 enh17315
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs398079119[chr17:64454604]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 64454592 64454613 IRF1 JASPAR yes 55437304
chr17 64454593 64454608 FOXP1 JASPAR yes 55437305
chr17 64454593 64454614 IRF1 JASPAR yes 55437306
chr17 64454594 64454615 IRF1 JASPAR yes 55437307
chr17 64454595 64454610 PRDM1 JASPAR yes 55437308
chr17 64454595 64454610 STAT2 JASPAR yes 55437309
chr17 64454596 64454610 STAT1 JASPAR yes 55437311
chr17 64454600 64454605 ETS2 TRANSFAC yes 55437312
chr17 64454603 64454618 FOXP1 JASPAR yes 55437313
Genes associated with rs398079119[chr17:64454604], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More