EnhancerDB
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  3. rs398080329[chr2:70329040]
Enhancers that have rs398080329[chr2:70329040]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 70317005 70376348 enh5639
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs398080329[chr2:70329040]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 70329020 70329041 IRF1 JASPAR yes 74894374
chr2 70329025 70329040 FOXP1 JASPAR yes 74894378
chr2 70329027 70329047 RREB1 JASPAR yes 74894379
chr2 70329029 70329044 FOXP1 JASPAR yes 74894380
chr2 70329030 70329041 FOXA1 JASPAR yes 74894381
chr2 70329030 70329045 FOXA1 JASPAR yes 74894382
chr2 70329031 70329043 FOXC2 JASPAR yes 74894383
chr2 70329032 70329044 FOXI1 JASPAR yes 74894384
Genes associated with rs398080329[chr2:70329040], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More