EnhancerDB
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  3. rs401223[chr13:113375721]
Enhancers that have rs401223[chr13:113375721]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr13 113356925 113401095 enh15512
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs401223[chr13:113375721]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr13 113375706 113375721 LEF1 JASPAR yes 60430054
chr13 113375707 113375722 AR JASPAR yes 60430055
chr13 113375716 113375731 LEF1 JASPAR yes 60430057
chr13 113375717 113375731 TCF7L2 JASPAR yes 60430058
chr13 113375720 113375726 LEF1 TRANSFAC yes 60430059
chr13 113375720 113375726 SOX10 JASPAR yes 60430060
Genes associated with rs401223[chr13:113375721], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More