EnhancerDB
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  3. rs4017896[chr2:232479528]
Enhancers that have rs4017896[chr2:232479528]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 232460065 232495135 enh6201
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
chr2 232479434 232479727 vista35162
VISTA
Transcript factors that have rs4017896[chr2:232479528]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 232476928 232480423 POLR2A UCSC Txn Factor no Conserved 108435689
chr2 232476928 232480423 POLR2A UCSC Txn Factor no Conserved 108435690
chr2 232476928 232480423 POLR2A UCSC Txn Factor no Conserved 108435691
chr2 232479376 232479706 BHLHE40 UCSC Txn Factor no Conserved 108435701
chr2 232479414 232479730 EBF1 UCSC Txn Factor no Conserved 108435702
chr2 232479519 232479532 NFKB1 JASPAR yes 22229333
chr2 232479519 232479532 NFKB1 JASPAR yes 81726203
chr2 232479527 232479538 NRF1 JASPAR yes 22229334
chr2 232479527 232479538 NRF1 JASPAR yes 81726204
chr2 232479528 232479539 NRF1 JASPAR yes 22229335
chr2 232479528 232479539 NRF1 JASPAR yes 81726205
Genes associated with rs4017896[chr2:232479528], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More