EnhancerDB
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  3. rs4020543[chr1:41876828]
Enhancers that have rs4020543[chr1:41876828]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 41849805 41888800 enh11788
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs4020543[chr1:41876828]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 41876824 41876830 GATA3 JASPAR yes 28386848
chr1 41876828 41876839 CEBPB JASPAR yes 28386849
Genes associated with rs4020543[chr1:41876828], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More