EnhancerDB
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  3. rs4078324[chr1:204264359]
Enhancers that have rs4078324[chr1:204264359]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 204245511 204275535 enh12577
Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 204261217 204266185 vista127
VISTA
Transcript factors that have rs4078324[chr1:204264359]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 204264346 204264360 TLX1 JASPAR yes 34689680
chr1 204264346 204264360 TLX1 JASPAR yes 71155667
chr1 204264358 204264367 PITX3 JASPAR yes 34689681
chr1 204264358 204264367 PITX3 JASPAR yes 71155668
chr1 204264358 204264368 GSC2 JASPAR yes 34689682
chr1 204264358 204264368 GSC JASPAR yes 34689683
chr1 204264358 204264368 GSC2 JASPAR yes 71155669
chr1 204264358 204264368 GSC JASPAR yes 71155670
chr1 204264359 204264367 RHOXF1 JASPAR yes 34689684
chr1 204264359 204264367 RHOXF1 JASPAR yes 71155671
Genes associated with rs4078324[chr1:204264359], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More