EnhancerDB
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  3. rs41510545[chr1:113450377]
Enhancers that have rs41510545[chr1:113450377]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 113444365 113452393 enh12155
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Stomach Muscle (A673) Placenta Colon (HCT116) Uterus Embryonic Stem Cell Line (H1-hESC) Pancreas Neural Stem Cells (H9) Heart
Transcript factors that have rs41510545[chr1:113450377]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 113450229 113450493 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21329759
chr1 113450249 113450427 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21329760
Genes associated with rs41510545[chr1:113450377], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 114356433 114414381 - PTPN22 ENSG00000134242.11 114414381 906056 Breast 0.355227 1036