EnhancerDB
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  3. rs422460[chr1:229359199]
Enhancers that have rs422460[chr1:229359199]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 229351665 229369695 enh12764
Liver Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs422460[chr1:229359199]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 229359180 229359710 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21390813
chr1 229359186 229359702 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21390814
chr1 229359189 229359203 ONECUT1 JASPAR yes 35976554
chr1 229359189 229359203 ONECUT2 JASPAR yes 35976555
chr1 229359189 229359203 ONECUT3 JASPAR yes 35976556
chr1 229359194 229359210 SOX4 JASPAR yes 35976557
Genes associated with rs422460[chr1:229359199], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More