EnhancerDB
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  3. rs4244004[chr1:19790434]
Enhancers that have rs4244004[chr1:19790434]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19747725 19800935 enh99
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs4244004[chr1:19790434]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19790423 19790439 SOX8 JASPAR yes 27193992
chr1 19790431 19790442 ESRRB JASPAR yes 27193994
chr1 19790432 19790447 NR2C2 JASPAR yes 27193995
chr1 19790433 19790441 NR4A2 JASPAR yes 27193996
chr1 19790434 19790454 ESR1 JASPAR yes 27193997
Genes associated with rs4244004[chr1:19790434], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More