EnhancerDB
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  3. rs4255830[chr17:78649230]
Enhancers that have rs4255830[chr17:78649230]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78617185 78655235 enh4633
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Placenta Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs4255830[chr17:78649230]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78649225 78649240 FOXP1 JASPAR yes 56266358
chr17 78649226 78649237 FOXP2 JASPAR yes 56266359
chr17 78649228 78649238 HOXA13 JASPAR yes 56266360
chr17 78649228 78649239 HOXA10 JASPAR yes 56266361
chr17 78649229 78649238 CDX1 JASPAR yes 56266362
chr17 78649229 78649240 CDX2 JASPAR yes 56266363
Genes associated with rs4255830[chr17:78649230], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More