EnhancerDB
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  3. rs4399486[chr14:77421660]
Enhancers that have rs4399486[chr14:77421660]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr14 77400862 77447355 enh3335
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs4399486[chr14:77421660]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr14 77421008 77421813 ZNF143 GTRD no Epithelial (MCF-7) 21631440
chr14 77421045 77421727 ZNF143 GTRD no Epithelial (MCF-7) 21631441
chr14 77421075 77421707 ZNF143 GTRD no Epithelial (MCF-7) 21631442
chr14 77421084 77421763 ZNF143 GTRD no Epithelial (MCF-7) 21631443
chr14 77421139 77421678 ZNF274 GTRD no Cervix (HeLa-S3) 21631445
chr14 77421167 77421713 ZBTB33 GTRD no Brain (SK-N-SH) 21631446
chr14 77421652 77421666 RXRB JASPAR yes 116711771
chr14 77421652 77421666 RXRG JASPAR yes 116711772
chr14 77421652 77421667 NR2C2 JASPAR yes 116711773
chr14 77421658 77421664 NFE2 TRANSFAC yes 116711774
chr14 77421659 77421673 GLIS3 JASPAR yes 116711775
Genes associated with rs4399486[chr14:77421660], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More