EnhancerDB
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  3. rs4402589[chr16:29954654]
Enhancers that have rs4402589[chr16:29954654]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 29952285 29958215 enh16628
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Bone (Osteoblast) Stomach Placenta Uterus Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs4402589[chr16:29954654]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 29954572 29955148 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21703935
chr16 29954572 29955148 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108191796
chr16 29954603 29955124 GATA1 UCSC Txn Factor no Conserved 108191797
chr16 29954605 29955155 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21703936
chr16 29954605 29955155 GATA2 UCSC Txn Factor no Conserved 108191798
chr16 29954605 29955155 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108191799
chr16 29954629 29955085 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21703937
chr16 29954629 29955085 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108191800
chr16 29954633 29955049 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21703938
chr16 29954633 29955049 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108191801
chr16 29954650 29954655 GATA2 JASPAR yes 10288575
chr16 29954651 29954660 PITX3 JASPAR yes 10288576
chr16 29954651 29954661 GSC JASPAR yes 10288577
chr16 29954652 29954660 RHOXF1 JASPAR yes 10288578
Genes associated with rs4402589[chr16:29954654], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More