EnhancerDB
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  3. rs4406706[chr1:212780471]
Enhancers that have rs4406706[chr1:212780471]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 212765205 212784697 enh12647
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs4406706[chr1:212780471]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 212778301 212781617 EZH2 UCSC Txn Factor no Conserved 107869174
chr1 212779921 212780831 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107869175
chr1 212780052 212787859 POLR2A UCSC Txn Factor no Conserved 107869176
chr1 212780210 212781000 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21379014
chr1 212780210 212781000 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107869177
chr1 212780418 212782777 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107869178
chr1 212780457 212780478 REST JASPAR yes 35141103
chr1 212780458 212780477 REST JASPAR yes 35141104
chr1 212780468 212780878 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107869179
Genes associated with rs4406706[chr1:212780471], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More