EnhancerDB
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  3. rs4423078[chr1:205261020]
Enhancers that have rs4423078[chr1:205261020]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 205259785 205270135 enh12589
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs4423078[chr1:205261020]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 205260611 205264392 ZNF274 GTRD no Bone Marrow (K562) 107861587
chr1 205260611 205264392 ZNF274 GTRD no Bone Marrow (K562) 107861588
chr1 205261012 205261023 NFKB1 JASPAR yes 34752188
chr1 205261012 205261025 NFKB1 JASPAR yes 34752189
chr1 205261012 205261025 NFKB2 JASPAR yes 34752190
chr1 205261013 205261023 NFKB1 JASPAR yes 34752191
chr1 205261013 205261024 NFKB1 JASPAR yes 34752192
chr1 205261017 205261030 TFAP2A JASPAR yes 34752193
chr1 205261017 205261030 TFAP2B JASPAR yes 34752194
chr1 205261017 205261030 TFAP2C JASPAR yes 34752195
chr1 205261017 205261031 EBF1 JASPAR yes 34752196
chr1 205261018 205261029 EBF1 JASPAR yes 34752197
Genes associated with rs4423078[chr1:205261020], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More