EnhancerDB
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  3. rs4445890[chr16:85237371]
Enhancers that have rs4445890[chr16:85237371]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85219145 85290912 enh16864
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs4445890[chr16:85237371]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85231788 85239840 TCF7L2 GTRD no Colon (HCT116) 21720868
chr16 85233505 85237815 TCF7L2 GTRD no Colon (HCT116) 21720908
chr16 85233641 85237669 TCF7L2 GTRD no Colon (HCT116) 21720914
chr16 85234078 85238980 TCF7L2 GTRD no Colon (HCT116) 21720936
chr16 85236054 85237861 TCF7L2 GTRD no Colon (HCT116) 21721075
chr16 85236176 85237683 TCF7L2 GTRD no Colon (HCT116) 21721088
chr16 85236654 85237419 TCF7L2 GTRD no Colon (HCT116) 21721100
chr16 85237124 85237384 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21721103
chr16 85237369 85237388 PAX5 JASPAR yes 12032129
Genes associated with rs4445890[chr16:85237371], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More