EnhancerDB
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  3. rs4451994[chr17:48965059]
Enhancers that have rs4451994[chr17:48965059]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 48954425 48973436 enh32228
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs4451994[chr17:48965059]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 48964104 48965074 TCF7L2 GTRD no Colon (HCT116) 21770258
chr17 48965043 48965059 POU4F2 JASPAR yes 54729286
chr17 48965043 48965059 POU4F3 JASPAR yes 54729287
chr17 48965045 48965059 FOXF2 JASPAR yes 54729288
chr17 48965045 48965059 ONECUT3 JASPAR yes 54729289
chr17 48965045 48965060 FOXP1 JASPAR yes 54729290
chr17 48965047 48965059 FOXC2 JASPAR yes 54729291
chr17 48965048 48965060 FOXI1 JASPAR yes 54729292
chr17 48965049 48965064 FOXP1 JASPAR yes 54729293
chr17 48965051 48965066 FOXP1 JASPAR yes 54729294
chr17 48965051 48965072 IRF1 JASPAR yes 54729295
chr17 48965052 48965067 FOXP1 JASPAR yes 54729296
chr17 48965052 48965073 IRF1 JASPAR yes 54729297
chr17 48965053 48965068 FOXP1 JASPAR yes 54729298
chr17 48965055 48965061 TBP TRANSFAC yes 54729299
Genes associated with rs4451994[chr17:48965059], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More