EnhancerDB
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  3. rs4492558[chr1:24612342]
Enhancers that have rs4492558[chr1:24612342]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 24599645 24630859 enh11619
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Kidney Epithelial (MCF-7) Skin (Keratinocyte) Stomach Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs4492558[chr1:24612342]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 24612341 24612345 H1TF2 TRANSFAC yes 27495909
chr1 24612341 24612345 NFE TRANSFAC yes 27495910
chr1 24612341 24612345 SRF TRANSFAC yes 27495911
Genes associated with rs4492558[chr1:24612342], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More