EnhancerDB
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  3. rs4598511[chr1:27982405]
Enhancers that have rs4598511[chr1:27982405]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27968485 27992074 enh178
Bone Marrow (K562) Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs4598511[chr1:27982405]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27982395 27982406 YY2 JASPAR yes 27719194
chr1 27982399 27982407 BSX JASPAR yes 27719195
chr1 27982401 27982405 YY1 TRANSFAC yes 27719196
chr1 27982402 27982411 SRY JASPAR yes 27719197
chr1 27982404 27982407 MYB TRANSFAC yes 27719198
Genes associated with rs4598511[chr1:27982405], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 27719148 27722318 + GPR3 ENSG00000181773.6 27719148 260087 Stomach 0.285389 391