EnhancerDB
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  3. rs4598946[chr17:65477767]
Enhancers that have rs4598946[chr17:65477767]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 65460484 65480775 enh32309
Astrocyte Colon (HCT116) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Kidney Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Spleen Muscle (Myotube) Lung Muscle (A673) Heart
chr17 65477756 65478333 vista25646
VISTA
Transcript factors that have rs4598946[chr17:65477767]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 65477756 65477767 PROP1 JASPAR yes 21279923
chr17 65477756 65477767 PROP1 JASPAR yes 55509798
chr17 65477758 65477769 HOXA10 JASPAR yes 21279924
chr17 65477758 65477769 HOXA10 JASPAR yes 55509799
chr17 65477759 65477768 CDX1 JASPAR yes 21279925
chr17 65477759 65477768 CDX1 JASPAR yes 55509800
chr17 65477759 65477770 CDX2 JASPAR yes 21279926
chr17 65477759 65477770 CDX2 JASPAR yes 55509801
chr17 65477766 65477777 HOXC13 JASPAR yes 21279927
chr17 65477766 65477777 HOXD12 JASPAR yes 21279928
chr17 65477766 65477777 HOXC13 JASPAR yes 55509802
chr17 65477766 65477777 HOXD12 JASPAR yes 55509803
Genes associated with rs4598946[chr17:65477767], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More