EnhancerDB
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  3. rs4653460[chr1:226844154]
Enhancers that have rs4653460[chr1:226844154]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226838901 226907579 enh973
Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs4653460[chr1:226844154]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 226844146 226844161 STAT1 JASPAR yes 35828499
chr1 226844149 226844161 ELF1 JASPAR yes 35828500
chr1 226844149 226844161 ELF4 JASPAR yes 35828501
chr1 226844151 226844160 ELK4 JASPAR yes 35828502
chr1 226844151 226844161 GABPA JASPAR yes 35828503
chr1 226844151 226844162 ELK4 JASPAR yes 35828504
chr1 226844153 226844159 ETS1 JASPAR yes 35828505
chr1 226844153 226844159 SPI1 JASPAR yes 35828506
Genes associated with rs4653460[chr1:226844154], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More