EnhancerDB
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  3. rs4660475[chr1:39612240]
Enhancers that have rs4660475[chr1:39612240]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 39588469 39628695 enh11759
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs4660475[chr1:39612240]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 39612233 39612248 AR JASPAR yes 28257987
chr1 39612233 39612250 NR3C2 JASPAR yes 28257988
chr1 39612233 39612251 RARA JASPAR yes 28257989
chr1 39612238 39612242 YY1 TRANSFAC yes 28257990
Genes associated with rs4660475[chr1:39612240], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More