EnhancerDB
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Enhancers that have rs4680047[chr3:153002250]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 152999949 153013375 enh21048
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Esophagus Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
chr3 153002176 153002347 vista42857
VISTA
Transcript factors that have rs4680047[chr3:153002250]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 153002065 153002449 MYC UCSC Txn Factor no Conserved 108530773
chr3 153002092 153002442 MAX UCSC Txn Factor no Conserved 108530774
chr3 153002118 153002442 CEBPB UCSC Txn Factor no Conserved 108530775
chr3 153002235 153002432 SPI1 UCSC Txn Factor no Conserved 108530776
chr3 153002242 153002255 SCRT2 JASPAR yes 6757186
chr3 153002242 153002255 SCRT2 JASPAR yes 71071246
chr3 153002242 153002257 SCRT1 JASPAR yes 6757187
chr3 153002242 153002257 SCRT1 JASPAR yes 71071247
chr3 153002245 153002257 HES5 JASPAR yes 6757188
chr3 153002245 153002257 HES5 JASPAR yes 71071248
chr3 153002246 153002256 CLOCK JASPAR yes 6757189
chr3 153002246 153002256 FIGLA JASPAR yes 6757190
chr3 153002246 153002256 MAX JASPAR yes 6757191
chr3 153002246 153002256 MLXIPL JASPAR yes 6757192
chr3 153002246 153002256 MNT JASPAR yes 6757193
chr3 153002246 153002256 MSC JASPAR yes 6757194
chr3 153002246 153002256 MYF6 JASPAR yes 6757195
chr3 153002246 153002256 SREBF2 JASPAR yes 6757196
chr3 153002246 153002256 CLOCK JASPAR yes 71071249
chr3 153002246 153002256 FIGLA JASPAR yes 71071250
chr3 153002246 153002256 MAX JASPAR yes 71071251
chr3 153002246 153002256 MLXIPL JASPAR yes 71071252
chr3 153002246 153002256 MNT JASPAR yes 71071253
chr3 153002246 153002256 MSC JASPAR yes 71071254
chr3 153002246 153002256 MYF6 JASPAR yes 71071255
chr3 153002246 153002256 SREBF2 JASPAR yes 71071256
chr3 153002247 153002257 MAX JASPAR yes 6757197
chr3 153002247 153002257 MAX JASPAR yes 71071257
chr3 153002248 153002253 MYC TRANSFAC yes 6757198
chr3 153002248 153002253 USF1 TRANSFAC yes 6757199
chr3 153002248 153002253 USF2 TRANSFAC yes 6757200
chr3 153002248 153002253 MYC TRANSFAC yes 71071258
chr3 153002248 153002253 USF1 TRANSFAC yes 71071259
chr3 153002248 153002253 USF2 TRANSFAC yes 71071260
Genes associated with rs4680047[chr3:153002250], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More