EnhancerDB
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Enhancers that have rs477257[chr18:55880518]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 55867165 55894619 enh32734
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Heart
Transcript factors that have rs477257[chr18:55880518]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 55880513 55880518 GATA2 JASPAR yes 110927527
chr18 55880513 55880525 FOXI1 JASPAR yes 110927528
chr18 55880516 55880520 YY1 TRANSFAC yes 110927529
chr18 55880516 55880526 HOXA13 JASPAR yes 110927530
chr18 55880517 55880528 CDX2 JASPAR yes 110927531
Genes associated with rs477257[chr18:55880518], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More