EnhancerDB
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  3. rs4782007[chr16:17411469]
Enhancers that have rs4782007[chr16:17411469]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 17386185 17415896 enh3921
Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Prostate (RWPE1)
Transcript factors that have rs4782007[chr16:17411469]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 17410850 17411612 ZNF274 GTRD no Blood (GM12878) 21694607
chr16 17410850 17411612 ZNF274 GTRD no Blood (GM12878) 108185669
chr16 17410859 17411512 ZNF274 GTRD no Blood (GM12878) 21694608
chr16 17410859 17411512 ZNF274 GTRD no Blood (GM12878) 108185670
chr16 17410896 17411542 ZNF274 GTRD no Blood (GM12878) 21694609
chr16 17410896 17411542 ZNF274 GTRD no Blood (GM12878) 108185671
chr16 17411205 17411707 ZNF274 GTRD no Liver (HepG2) 108185672
chr16 17411233 17411644 ZNF274 GTRD no Liver (HepG2) 108185673
chr16 17411238 17411720 ZNF274 GTRD no Liver (HepG2) 108185674
chr16 17411468 17411473 SP1 TRANSFAC yes 9796314
Genes associated with rs4782007[chr16:17411469], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr16 17195626 17564738 - XYLT1 ENSG00000103489.7 17564738 0 Heart 0.076144 14586