EnhancerDB
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Enhancers that have rs4786480[chr16:4343620]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 4330820 4352135 enh16514
Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs4786480[chr16:4343620]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 4342740 4343682 ZNF143 GTRD no Epithelial (MCF-7) 21686436
chr16 4342895 4346581 ZBTB33 GTRD no Lung (A549) 108176172
chr16 4342933 4343753 ZNF143 GTRD no Epithelial (MCF-7) 21686437
chr16 4342984 4343794 ZNF143 GTRD no Epithelial (MCF-7) 21686438
chr16 4343227 4348676 ZNF143 GTRD no Epithelial (MCF-7) 21686440
chr16 4343227 4348676 ZNF143 GTRD no Epithelial (MCF-7) 108176173
chr16 4343502 4344848 ZBTB33 GTRD no Lung (A549) 108176174
chr16 4343617 4343626 HIC2 JASPAR yes 9267692
chr16 4343618 4343638 TP53 JASPAR yes 9267693
chr16 4343620 4343624 LFA1 TRANSFAC yes 9267694
chr16 4343620 4343640 TP63 JASPAR yes 9267695
Genes associated with rs4786480[chr16:4343620], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More