EnhancerDB
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  3. rs4789788[chr17:80510285]
Enhancers that have rs4789788[chr17:80510285]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80480565 80515355 enh4649
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs4789788[chr17:80510285]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80510276 80510292 RFX2 JASPAR yes 56373986
chr17 80510276 80510292 RFX3 JASPAR yes 56373987
chr17 80510276 80510292 RFX4 JASPAR yes 56373988
chr17 80510276 80510292 RFX5 JASPAR yes 56373989
chr17 80510277 80510296 RFX2 JASPAR yes 56373990
Genes associated with rs4789788[chr17:80510285], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More