EnhancerDB
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  3. rs4791297[chr17:65419210]
Enhancers that have rs4791297[chr17:65419210]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 65392925 65424130 enh17321
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Lung (A549) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs4791297[chr17:65419210]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 65416680 65419467 ZNF143 GTRD no Epithelial (MCF-7) 21782166
chr17 65416680 65419467 ZNF143 GTRD no Epithelial (MCF-7) 108285779
chr17 65417439 65419394 ZNF143 GTRD no Epithelial (MCF-7) 21782167
chr17 65417439 65419394 ZNF143 GTRD no Epithelial (MCF-7) 108285781
chr17 65418043 65419292 ZNF143 GTRD no Epithelial (MCF-7) 21782202
chr17 65418043 65419292 ZNF143 GTRD no Epithelial (MCF-7) 108285823
chr17 65418305 65419304 ZBTB33 GTRD no Lung (A549) 21782220
chr17 65418305 65419304 ZBTB33 GTRD no Lung (A549) 108285849
chr17 65418374 65419289 ZBTB33 GTRD no Lung (A549) 21782221
chr17 65418374 65419289 ZBTB33 GTRD no Lung (A549) 108285850
chr17 65419195 65419210 HNF4G JASPAR yes 55501670
chr17 65419196 65419211 HNF4A JASPAR yes 55501671
chr17 65419199 65419215 SOX8 JASPAR yes 55501672
chr17 65419207 65419216 SOX9 JASPAR yes 55501674
Genes associated with rs4791297[chr17:65419210], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More