EnhancerDB
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Enhancers that have rs479457[chr1:234659075]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234649189 234693444 enh991
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs479457[chr1:234659075]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234656231 234660423 ZNF274 GTRD no Cervix (HeLa-S3) 21393809
chr1 234656231 234660423 ZNF274 GTRD no Cervix (HeLa-S3) 107880091
chr1 234656231 234660423 ZNF274 GTRD no Cervix (HeLa-S3) 107880092
chr1 234656314 234660388 ZBTB33 GTRD no Lung (A549) 107880094
chr1 234656314 234660388 ZBTB33 GTRD no Lung (A549) 107880095
chr1 234656518 234661086 ZBTB33 GTRD no Lung (A549) 107880098
chr1 234656518 234661086 ZBTB33 GTRD no Lung (A549) 107880099
chr1 234656621 234660270 ZBTB33 GTRD no Lung (A549) 107880102
chr1 234656621 234660270 ZBTB33 GTRD no Lung (A549) 107880103
chr1 234656629 234659177 ZNF143 GTRD no Epithelial (MCF-7) 21393820
chr1 234656629 234659177 ZNF143 GTRD no Epithelial (MCF-7) 107880104
chr1 234656751 234660437 TCF7L2 GTRD no Colon (HCT116) 21393830
chr1 234656751 234660437 TCF7L2 GTRD no Colon (HCT116) 107880109
chr1 234656751 234660437 TCF7L2 GTRD no Colon (HCT116) 107880110
chr1 234656935 234660008 ZBTB33 GTRD no Lung (A549) 107880115
chr1 234656935 234660008 ZBTB33 GTRD no Lung (A549) 107880116
chr1 234656967 234660453 ZBTB33 GTRD no Lung (A549) 107880117
chr1 234656967 234660453 ZBTB33 GTRD no Lung (A549) 107880118
chr1 234657616 234659135 TEF1 GTRD no Bone (Osteoblast) 21393904
chr1 234657616 234659135 TEF1 GTRD no Bone (Osteoblast) 107880119
chr1 234657954 234659132 ZNF274 GTRD no Liver (HepG2) 21393915
chr1 234657954 234659132 ZNF274 GTRD no Liver (HepG2) 107880130
chr1 234657963 234660479 ZNF274 GTRD no Liver (HepG2) 21393916
chr1 234657963 234660479 ZNF274 GTRD no Liver (HepG2) 107880131
chr1 234657963 234660479 ZNF274 GTRD no Liver (HepG2) 107880132
chr1 234658542 234659090 ZNF274 GTRD no Liver (HepG2) 21393941
chr1 234658542 234659090 ZNF274 GTRD no Liver (HepG2) 107880174
chr1 234658551 234659112 ZNF274 GTRD no Liver (HepG2) 21393942
chr1 234658551 234659112 ZNF274 GTRD no Liver (HepG2) 107880175
chr1 234658631 234659204 ZNF274 GTRD no Liver (HepG2) 21393943
chr1 234658631 234659204 ZNF274 GTRD no Liver (HepG2) 107880178
chr1 234658662 234659149 ZNF274 GTRD no Liver (HepG2) 21393944
chr1 234658662 234659149 ZNF274 GTRD no Liver (HepG2) 107880179
chr1 234658759 234659375 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21393945
chr1 234658759 234659375 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107880181
chr1 234658759 234659375 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107880182
chr1 234658849 234659393 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21393946
chr1 234658849 234659393 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107880183
chr1 234658849 234659393 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107880184
chr1 234658853 234659193 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21393947
chr1 234658857 234659297 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21393948
chr1 234658857 234659297 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107880185
chr1 234658857 234659621 TEAD4 UCSC Txn Factor no Conserved 107880186
chr1 234658860 234659240 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21393949
chr1 234658860 234659240 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107880187
chr1 234658892 234659192 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21393950
chr1 234658898 234659158 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21393951
chr1 234658945 234659158 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21393952
chr1 234658951 234659241 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21393953
chr1 234658951 234659241 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107880188
chr1 234658989 234659110 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21393954
chr1 234658991 234659180 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21393955
chr1 234658994 234659136 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21393956
chr1 234659063 234659077 TCF7L2 JASPAR yes 36283201
Genes associated with rs479457[chr1:234659075], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More