EnhancerDB
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  3. rs4868204[chr5:172204629]
Enhancers that have rs4868204[chr5:172204629]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172200585 172237795 enh22816
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs4868204[chr5:172204629]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172204315 172205790 POLR2A UCSC Txn Factor no Conserved 108537492
chr5 172204625 172204634 SOX9 JASPAR yes 67825240
chr5 172204629 172204644 TFAP2A JASPAR yes 67825241
chr5 172204629 172204644 TFAP2C JASPAR yes 67825242
Genes associated with rs4868204[chr5:172204629], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More